Homology Detection Online Services Bioinformatics Biology

Detection and assessment of similarity between distantly related sequences by means of a variety of remotely-executable software - from the Swiss Inst. for Experimental Cancer Research.

• GeneMatcher - Access to Smith-Waterman-based FDF sequence comparison program, with homology detection excellent explanation of when to use it vs. homology detection BLAST - from the Univ. of Lausanne, FR.
• The ISREC Group Servers - Detection and assessment of similarity between distantly related online services sequences homology detection by means of a variety of remotely-executable online services software - homology detection from the Swiss Inst. for Experimental online services Cancer Research.
• Sequence Alignment and Modeling System - Implementation of hidden Markov models for sequence analysis. Free homology detection UNIX software for nonprofit groups, and sequences can be submitted homology detection online.
• BLAST - NCBI\\'s sequence similarity search tool designed to support analysis of bioinformatics nucleotide and protein databases.
• ESPript - Formatting of multiple sequence alignments to a color postscript file. bioinformatics Can include graphical features by using PDB entry.
• PatternHunter - Commercial general homology search software significantly faster than homology detection BLAST.
• Interactive Blast Query - Utility for online manipulation of Blast results. bioinformatics Results organized homology detection in a table format.
• mreps : maximal tandem repeats search - Open source tool for identifying serial repeats (tandem online services repeats) homology detection in DNA sequences.
• WU-BLAST Archives - Sensitive, selective, and rapid sequence database searching with bioinformatics gapped alignments homology detection - from Washington Univ.-St.Louis.
• HMM library for all proteins of known structure - This is a server for structural superfamily assignments online services to protein sequences using Hidden Markov Models. online services The services included are: -homology searching online services -alignments -genome assignments
• GWBLAST - Genome-Wide BLAST search for similarity searching against genes or proteins. online services Integrated with multiple alignments and phylogenetic tree capabilities.
• GeneStream II - Sequence comparison and search programs, including the rigorous Smith-Waterman algorithm (in FastA and Ssearch), from the IGH, Montpellier FR.
• Meta-MEME - Software toolkit for building and using motif-based hidden homology detection Markov homology detection models of DNA and proteins - from homology detection the Univ. homology detection of California-San Diego.

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