Quantitative Genetics Software Genetics Biology


List of resources with links to programs and notes on a range of subjects including animal and plant breeding, and evolutionary and human genetics.








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Quantitative Genetics

Editor's Picks:

Genetic Analysis Software Database* - Extensive, regularly-updated directory of linkage, mapping, and pedigree statistics software with links to obtain freely available copies.

  • VCE - Groeneveld\\'s Variance Component Estimation software was developed for genetics animal breeding genetics problems. WIN and UNIX versions genetics are free for research genetics use. PEST documentation genetics is also available here.
  • Locus Technology, Inc - Colony management, supports creation and tracking of research animals and for transgenic and congenic lines, knockouts and outbred strains.
  • The CompuPed 4.0 Pedigree Program - Extended and reverse pedigrees, inbreeding coefficients and genetic quantitative genetics inheritance genetics capabilities for Win and Mac. Download quantitative genetics a demo genetics or order online.
  • DESIRE - Explore possible selection outcomes when goals (desired gains) software are set for traits. This free WIN software program is also contained in GENUP.
  • Big Bench Software - Commercial software for the management of transgenic mouse genetics colonies. Windows and Mac OS X. Demo version genetics available.
  • The Rosetta Syllego System - The system is a resource for managing genetic variation information quantitative genetics and integrating relevant study data from various sources so that quantitative genetics scientists and researchers can better plan and execute genetic studies.
  • CircuSoft Instrumentation LLC - Transgenic mouse colony tracking and management software for the Mac and Windows. Includes demo software and manuals.
  • Progeny Software - Supply pedigree drawing and genetic data management software genetics for genetic research with a built-in customizable relational genetics database.
  • Mosaic Vivarium - Web-based software solution for breeding colony management. The software is well-suited to management of transgenic and genetically-modified mouse breeding colonies.
  • Finnish Forest Genetics and Tree Breeding - Links to population and quantitative genetic software of interest in software tree improvement, but also useful in other species.
  • Pedigree Viewer - Unique display and examination tool for large pedigrees, software with inbreeding and genetic merit data also. software Free WIN program.
  • Quantitative Genetics Resources - List of resources with links to programs and notes on a range of subjects including animal and plant breeding, and evolutionary and human genetics.
  • Animal Breeding & Genetics, Wageningen - Provides programmes in the area of animal breeding including SIP software (Selection Index Program), MAGGIC (Gibbs Sampling) and GENEFLOW. Free software software for WIN.
  • DFREML - Meyer\\'s variance component estimation software for animal breeding software is free genetics for research purposes, available for UNIX, software DOS and FORTRAN source genetics code.
  • ASReml Cookbook - Statistical software designed for fitting mixed models for quantitative genetics large datasets. Contains commented code for univariate and quantitative genetics multivariate analysis including longitudinal and spatial analysis.
  • MapPop - Software for selective mapping and bin mapping. Windows version, documentation quantitative genetics and references are available for download.
  • GeneFlow Inc - This Virginia, USA company provides software (GeneFlow, SynerGene, software QTLlocate) and services oriented towards plant breeding. software Website does not give prices or operating systems software supported.
  • LAMS - Freeware record keeping system designed for a breeding genetics colony of transgenic mice. Includes program description, system genetics requirements, and installation instructions.
  • Genup - Free software to assist learning quantitative genetic concepts genetics (animal breeding) for WIN.
  • R/qtl: A QTL Mapping Environment - Program for mapping quantitative trait loci in experimental crosses. Includes software sample graphics and tutorial in pdf format.
  • PowerMarker - Set of statistical methods for discrete genetic data software analysis, designed genetics especially for microsatellite data analysis. Includes software downloadable versions for Windows.
  • Statistical Genetics Software - Collection of primarily Fortan 77 programs for genetic software analysis. Requires registration to download. Site not updated software since 1999.
  • Ignacy Misztal - Animal breeding oriented programs for sparse matrix multiple trait REML genetics and BLUP. Fortran source is free for research use.
  • DRIFT - Graphically represents the effect of genetic drift on quantitative genetics gene software frequency of one or more populations for quantitative genetics a single software locus, two allele model in a quantitative genetics closed population using software stochastic simulation methods. The DOS quantitative genetics program is free.
  • Agriculture Business Research Institute - ABRI provides recording systems for all species of commercial livestock. quantitative genetics Software offered include Dairy Express, Saltbush and Breedplan.
  • PopGen - Software that models population genetics with emphasis on genetics genetic drift, selection, and migration. Windows 95.
  • Taxonomy 3 - A package of SAS macros for target discovery, quantitative genetics detection of subphenotype and genetic heterogeneity. Can use quantitative genetics an unlimited numbers of markers in a single quantitative genetics multivariate analysis.
  • Laboratory of Plant Breeding, Wageningen - Offers free downloadable genetics and plant breeding related genetics software.
  • GeneticStudio - Software platform targeting the analysis of population genetic data. Provides some brief videos to demonstrate the application.


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